Coq6 is responsible for the C4-deamination reaction in coenzyme Q biosynthesis in Saccharomyces cerevisiae

J Biol Chem. 2015 Oct 2;290(40):24140-51. doi: 10.1074/jbc.M115.675744. Epub 2015 Aug 10.

Abstract

The yeast Saccharomyces cerevisiae is able to use para-aminobenzoic acid (pABA) in addition to 4-hydroxybenzoic acid as a precursor of coenzyme Q, a redox lipid essential to the function of the mitochondrial respiratory chain. The biosynthesis of coenzyme Q from pABA requires a deamination reaction at position C4 of the benzene ring to substitute the amino group with an hydroxyl group. We show here that the FAD-dependent monooxygenase Coq6, which is known to hydroxylate position C5, also deaminates position C4 in a reaction implicating molecular oxygen, as demonstrated with labeling experiments. We identify mutations in Coq6 that abrogate the C4-deamination activity, whereas preserving the C5-hydroxylation activity. Several results support that the deletion of Coq9 impacts Coq6, thus explaining the C4-deamination defect observed in Δcoq9 cells. The vast majority of flavin monooxygenases catalyze hydroxylation reactions on a single position of their substrate. Coq6 is thus a rare example of a flavin monooxygenase that is able to act on two different carbon atoms of its C4-aminated substrate, allowing its deamination and ultimately its conversion into coenzyme Q by the other proteins constituting the coenzyme Q biosynthetic pathway.

Keywords: Saccharomyces cerevisiae; coenzyme Q; deamination; flavin; hydroxylase; isotopic tracer; mass spectrometry (MS); monooxygenase; mutagenesis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 4-Aminobenzoic Acid / chemistry
  • Carbon / chemistry
  • Crystallography, X-Ray
  • Gene Deletion
  • Gene Expression Regulation, Fungal*
  • Hydroxylation
  • Mass Spectrometry
  • Mitochondria / metabolism
  • Mixed Function Oxygenases / metabolism
  • Models, Chemical
  • Mutagenesis
  • Mutation
  • Plasmids / metabolism
  • Point Mutation
  • Protein Structure, Tertiary
  • Saccharomyces cerevisiae / metabolism*
  • Saccharomyces cerevisiae Proteins / metabolism*
  • Ubiquinone / biosynthesis*
  • Ubiquinone / metabolism

Substances

  • Saccharomyces cerevisiae Proteins
  • ubiquinone 6
  • Ubiquinone
  • Carbon
  • Mixed Function Oxygenases
  • 4-Aminobenzoic Acid

Associated data

  • PDB/2X3N
  • PDB/4K22
  • PDB/4N9X