Complete mitochondrial genome of a red calcified alga Calliarthron tuberculosum (Corallinales)

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Jul;27(4):2554-6. doi: 10.3109/19401736.2015.1038801. Epub 2015 Aug 10.

Abstract

454 GS FLX Titanium sequencing data were used to obtain the complete mitochondrial genome of Calliarthron tuberculosum (26,469 bp). The mitogenome contains 44 genes, including 2 ribosomal RNA, 19 transfer RNA, 5 ribosomal proteins, 1 ymf, 2 open reading frames (ORFs) and 16 genes involved in cellular respiration. The secY and rps12 are overlapped by 69 bp. rps3 and rpl16 also have a 45 bp overlapped region. Except for open reading frames near stem-loop region, the results show Calliarthron tuberculosum mtDNA has a high similarity with other Florideophyceae algae mitogenomes in gene synteny, structure and gene content. Phylogeny analysis indicates a close genetic relationship of Calliarthron tuberculosum with Sporolithon durum.

Keywords: Calliarthron tuberculosum; Florideophyceae; mtDNA.

MeSH terms

  • DNA, Mitochondrial / genetics
  • Genome, Mitochondrial / genetics*
  • Genome, Plant / genetics
  • Open Reading Frames / genetics
  • Phylogeny
  • Plant Proteins / genetics
  • RNA, Ribosomal / genetics
  • RNA, Transfer / genetics
  • Rhodophyta / classification
  • Rhodophyta / genetics*
  • Sequence Analysis, DNA

Substances

  • DNA, Mitochondrial
  • Plant Proteins
  • RNA, Ribosomal
  • RNA, Transfer