Cultivation-dependent analysis of the microbial diversity associated with the seagrass meadows in Xincun Bay, South China Sea

Ecotoxicology. 2015 Oct;24(7-8):1540-7. doi: 10.1007/s10646-015-1519-4. Epub 2015 Jul 23.

Abstract

Microbial communities have largely existed in the seagrass meadows. A total of 496 strains of the bacteria in the seagrass meadows, which belonged to 50 genera, were obtained by the plate cultivation method from three sites of Xincun Bay, South China Sea. The results showed that Bacillales and Vibrionales accounted for the highest proportions of organisms in all communities. The diversity of the bacteria in the sediment was higher than that associated with seagrass. Thalassia hemperichii possessed the highest abundance of bacteria, followed by Enhalus acoroides and Cymodocea rotundata. Robust seasonal dynamics in microbial community composition were also observed. It was found that microbial activities were closely tied to the growth stage of the seagrass. The microbial distribution was the lowest in site 3. The abundance of the bacteria was linked to the interactions between bacteria and plants, the condition of plant and even the coastal water quality and the nutrition level in the sediment.

Keywords: 16S rRNA gene; Bacteria; Cultivation; South China Sea; The seagrass meadows; Xincun Bay.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alismatales / microbiology*
  • Bacteria / classification*
  • Bacteria / genetics
  • Bacteria / growth & development
  • Bays
  • China
  • DNA, Bacterial / genetics
  • Ecosystem
  • Geologic Sediments / microbiology*
  • Molecular Sequence Data
  • Phylogeny
  • RNA, Ribosomal, 16S / genetics
  • Seawater / microbiology
  • Sequence Analysis, DNA
  • Species Specificity

Substances

  • DNA, Bacterial
  • RNA, Ribosomal, 16S