Interaction of a novel fluorescent GTP analogue with the small G-protein K-Ras

J Biochem. 2016 Jan;159(1):41-8. doi: 10.1093/jb/mvv071. Epub 2015 Jul 15.

Abstract

A novel fluorescent guanosine 5'-triphosphate (GTP) analogue, 2'(3')-O-{6-(N-(7-nitrobenz-2-oxa-l,3-diazol-4-yl)amino) hexanoic}-GTP (NBD-GTP), was synthesized and utilized to monitor the effect of mutations in the functional region of mouse K-Ras. The effects of the G12S, A59T and G12S/A59T mutations on GTPase activity, nucleotide exchange rates were compared with normal Ras. Mutation at A59T resulted in reduction of the GTPase activity by 0.6-fold and enhancement of the nucleotide exchange rate by 2-fold compared with normal Ras. On the other hand, mutation at G12S only slightly affected the nucleotide exchange rate and did not affect the GTPase activity. We also used NBD-GTP to study the effect of these mutations on the interaction between Ras and SOS1, a guanine nucleotide exchange factor. The mutation at A59T abolished the interaction with SOS1. The results suggest that the fluorescent GTP analogue, NBD-GTP, is applicable to the kinetic studies for small G-proteins.

Keywords: G-proteins; GEF; Ras; fluorescence; nucleotide analogue.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 4-Chloro-7-nitrobenzofurazan / analogs & derivatives*
  • 4-Chloro-7-nitrobenzofurazan / chemical synthesis
  • 4-Chloro-7-nitrobenzofurazan / chemistry
  • 4-Chloro-7-nitrobenzofurazan / metabolism
  • Animals
  • Fluorescent Dyes / chemical synthesis
  • Fluorescent Dyes / chemistry
  • Fluorescent Dyes / metabolism*
  • Guanine Nucleotide Exchange Factors / metabolism
  • Guanosine Triphosphate / analogs & derivatives*
  • Guanosine Triphosphate / chemical synthesis
  • Guanosine Triphosphate / chemistry
  • Guanosine Triphosphate / metabolism*
  • Kinetics
  • Mice
  • Monomeric GTP-Binding Proteins / genetics
  • Monomeric GTP-Binding Proteins / metabolism*
  • Mutation
  • Protein Binding
  • Proto-Oncogene Proteins p21(ras) / genetics
  • Proto-Oncogene Proteins p21(ras) / metabolism*
  • SOS1 Protein / metabolism

Substances

  • Fluorescent Dyes
  • Guanine Nucleotide Exchange Factors
  • SOS1 Protein
  • Guanosine Triphosphate
  • Hras protein, mouse
  • Monomeric GTP-Binding Proteins
  • Proto-Oncogene Proteins p21(ras)
  • 4-Chloro-7-nitrobenzofurazan