A Two-step Protein Quality Control Pathway for a Misfolded DJ-1 Variant in Fission Yeast

J Biol Chem. 2015 Aug 21;290(34):21141-21153. doi: 10.1074/jbc.M115.662312. Epub 2015 Jul 7.

Abstract

A mutation, L166P, in the cytosolic protein, PARK7/DJ-1, causes protein misfolding and is linked to Parkinson disease. Here, we identify the fission yeast protein Sdj1 as the orthologue of DJ-1 and calculate by in silico saturation mutagenesis the effects of point mutants on its structural stability. We also map the degradation pathways for Sdj1-L169P, the fission yeast orthologue of the disease-causing DJ-1 L166P protein. Sdj1-L169P forms inclusions, which are enriched for the Hsp104 disaggregase. Hsp104 and Hsp70-type chaperones are required for efficient degradation of Sdj1-L169P. This also depends on the ribosome-associated E3 ligase Ltn1 and its co-factor Rqc1. Although Hsp104 is absolutely required for proteasomal degradation of Sdj1-L169P aggregates, the degradation of already aggregated Sdj1-L169P occurs independently of Ltn1 and Rqc1. Thus, our data point to soluble Sdj1-L169P being targeted early by Ltn1 and Rqc1. The fraction of Sdj1-L169P that escapes this first inspection then forms aggregates that are subsequently cleared via an Hsp104- and proteasome-dependent pathway.

Keywords: Parkinson disease; Parkinson disease (autosomal recessive, early onset) 7 (PARK7); chaperone; proteasome; proteostasis; ubiquitin.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Triphosphatases / genetics
  • Adenosine Triphosphatases / metabolism*
  • Amino Acid Sequence
  • Coenzymes / chemistry
  • Coenzymes / metabolism*
  • HSP70 Heat-Shock Proteins / genetics
  • HSP70 Heat-Shock Proteins / metabolism*
  • Heat-Shock Proteins / genetics
  • Heat-Shock Proteins / metabolism*
  • Humans
  • Intracellular Signaling Peptides and Proteins / chemistry*
  • Intracellular Signaling Peptides and Proteins / genetics
  • Intracellular Signaling Peptides and Proteins / metabolism
  • Models, Molecular
  • Molecular Sequence Data
  • Mutation
  • Oncogene Proteins / chemistry*
  • Oncogene Proteins / genetics
  • Oncogene Proteins / metabolism
  • Proteasome Endopeptidase Complex / metabolism
  • Protein Aggregates
  • Protein Deglycase DJ-1
  • Protein Folding
  • Protein Structure, Secondary
  • Protein Structure, Tertiary
  • Proteolysis
  • Schizosaccharomyces / genetics
  • Schizosaccharomyces / metabolism*
  • Schizosaccharomyces pombe Proteins / chemistry*
  • Schizosaccharomyces pombe Proteins / genetics
  • Schizosaccharomyces pombe Proteins / metabolism
  • Sequence Alignment
  • Sequence Homology, Amino Acid
  • Ubiquitin-Protein Ligases / genetics
  • Ubiquitin-Protein Ligases / metabolism*

Substances

  • Coenzymes
  • HSP70 Heat-Shock Proteins
  • Heat-Shock Proteins
  • Intracellular Signaling Peptides and Proteins
  • Oncogene Proteins
  • Protein Aggregates
  • Schizosaccharomyces pombe Proteins
  • Ubiquitin-Protein Ligases
  • PARK7 protein, human
  • Protein Deglycase DJ-1
  • Proteasome Endopeptidase Complex
  • Adenosine Triphosphatases
  • HSP104 protein, S pombe

Associated data

  • PDB/4QYT