Global 5-methylcytosine alterations in DNA during ageing of Quercus robur seeds

Ann Bot. 2015 Sep;116(3):369-76. doi: 10.1093/aob/mcv104. Epub 2015 Jul 1.

Abstract

Background and aims: Epigenetic regulation plays an important role in the management of plant growth, development and response to stress factors, and several reports have indicated that DNA methylation plays a critical role in seed development and viability. This study examines changes in 5-methylcytosine (m(5)C) levels in the DNA of seeds during ageing, a process that has important implications for plant conservation and agriculture.

Methods: Changes in the global level of m(5)C were measured in mature seeds of oak, Quercus robur. The extent of DNA methylation was measured using a protocol based on two-dimensional thin-layer chromatography. Viability of seeds was determined by germination and seedling emergence tests.

Key results: An ageing-related decrease in total m(5)C during storage of recalcitrant seeds was highly and significantly correlated with a decrease in seed viability, as reflected by a reduction in germination (r = 0·8880) and seedling emergence (r = 0·8269).

Conclusions: The decrease in viability during ageing of Q. robur seeds is highly correlated with a global decline in the amount of m(5)C in genomic DNA, and it is possible that this may represent a typical response to ageing and senescence in recalcitrant seeds. Potential mechanisms that drive changes in genomic DNA methylation during ageing are discussed, together with their implications for seed viability.

Keywords: 5-methylcytosine; DNA methylation; Quercus robur; dormancy; epigenetics; pendunculate oak; recalcitrant seed.; seed ageing.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 5-Methylcytosine / metabolism*
  • DNA Methylation
  • Epigenesis, Genetic*
  • Quercus / genetics*
  • Quercus / growth & development
  • Quercus / metabolism
  • Seeds / genetics
  • Seeds / growth & development
  • Seeds / metabolism

Substances

  • 5-Methylcytosine