The complete mitochondrial genome of Galeruca daurica (Joannis) (Coleoptera: Chrysomelidae)

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Jul;27(4):2891-2. doi: 10.3109/19401736.2015.1060424. Epub 2015 Jun 30.

Abstract

Galeruca daurica (Joannis) (Coleoptera: Chrysomelidae) is one of important pests in the Inner Mongolia grasslands. The complete mitochondrial genome was sequenced. The genome is 16 615 bp long, with an AT content of 78.1%, containing 37 typical animal mitochondrial genes and an AT-rich region. All 13 PCGs share the start codon ATN, and the usual termination codons (TAA and TAG) are found from 13 protein-coding genes, except for COI, COII, and ND4 (T). All the 22 typical animal tRNA genes are found in G. daurica mt-genome, and most of the tRNAs could be folded into the classic cloverleaf secondary structure except for tRNA-Ser (AGN), which lacks the dihydrouracil (DHU) stem. The sizes of the large ribosomal RNA genes are 1276 bp long and small ribosomal RNA genes are 747 bp long. The AT content of the AT-rich region is 79.0%. Phylogenetic analysis supports that the coleopteran insects from the same family cluster in the same group, and Chrysomelidae and Tenebrionidae are basal to the Cerambycidae. Galeruca daurica has a closest relationship with Diabrotica barberi and Diabrotica virgifera.

Keywords: Chrysomelidae; Galeruca daurica; mitochondrial genome; phylogenetic analysis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • AT Rich Sequence / genetics
  • Animals
  • Codon, Terminator / genetics
  • Coleoptera / classification
  • Coleoptera / genetics*
  • Genome, Mitochondrial / genetics*
  • Phylogeny
  • RNA, Ribosomal / genetics
  • RNA, Transfer / genetics
  • Sequence Analysis, DNA

Substances

  • Codon, Terminator
  • RNA, Ribosomal
  • RNA, Transfer