Paxillin-dependent regulation of IGF2 and H19 gene cluster expression

J Cell Sci. 2015 Aug 15;128(16):3106-16. doi: 10.1242/jcs.170985. Epub 2015 Jun 26.

Abstract

Paxillin (PXN) is a focal adhesion protein that has been implicated in signal transduction from the extracellular matrix. Recently, it has been shown to shuttle between the cytoplasm and the nucleus. When inside the nucleus, paxillin promotes cell proliferation. Here, we introduce paxillin as a transcriptional regulator of IGF2 and H19 genes. It does not affect the allelic expression of the two genes; rather, it regulates long-range chromosomal interactions between the IGF2 or H19 promoter and a shared distal enhancer on an active allele. Specifically, paxillin stimulates the interaction between the enhancer and the IGF2 promoter, thus activating IGF2 gene transcription, whereas it restrains the interaction between the enhancer and the H19 promoter, downregulating the H19 gene. We found that paxillin interacts with cohesin and the mediator complex, which have been shown to mediate long-range chromosomal looping. We propose that these interactions occur at the IGF2 and H19 gene cluster and are involved in the formation of loops between the IGF2 and H19 promoters and the enhancer, and thus the expression of the corresponding genes. These observations contribute to a mechanistic explanation of the role of paxillin in proliferation and fetal development.

Keywords: Cohesin; Enhancer; H19; IGF2; Imprinting; Paxillin.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Cycle Proteins / genetics
  • Cell Proliferation / drug effects
  • Cell Proliferation / genetics*
  • Chromosomal Proteins, Non-Histone / genetics
  • Cohesins
  • DNA Methylation / genetics
  • Enhancer Elements, Genetic
  • Extracellular Matrix / genetics
  • Fetal Development / genetics*
  • Focal Adhesions / genetics
  • Gene Expression Regulation, Developmental
  • Genomic Imprinting / genetics
  • Hep G2 Cells
  • Humans
  • Insulin-Like Growth Factor II / biosynthesis*
  • Insulin-Like Growth Factor II / genetics
  • Paxillin / administration & dosage*
  • Promoter Regions, Genetic
  • RNA, Long Noncoding / biosynthesis*
  • RNA, Long Noncoding / genetics
  • Signal Transduction / drug effects

Substances

  • Cell Cycle Proteins
  • Chromosomal Proteins, Non-Histone
  • H19 long non-coding RNA
  • IGF2 protein, human
  • Paxillin
  • RNA, Long Noncoding
  • Insulin-Like Growth Factor II