Integrated analysis of microRNAs, transcription factors and target genes expression discloses a specific molecular architecture of hyperdiploid multiple myeloma

Oncotarget. 2015 Aug 7;6(22):19132-47. doi: 10.18632/oncotarget.4302.

Abstract

Multiple Myeloma (MM) is a malignancy characterized by the hyperdiploid (HD-MM) and the non-hyperdiploid (nHD-MM) subtypes. To shed light within the molecular architecture of these subtypes, we used a novel integromics approach. By annotated MM patient mRNA/microRNA (miRNA) datasets, we investigated mRNAs and miRNAs profiles with relation to changes in transcriptional regulators expression. We found that HD-MM displays specific gene and miRNA expression profiles, involving the Signal Transducer and Activator of Transcription (STAT)3 pathway as well as the Transforming Growth Factor-beta (TGFβ) and the transcription regulator Nuclear Protein-1 (NUPR1). Our data define specific molecular features of HD-MM that may translate in the identification of novel relevant druggable targets.

Keywords: hyperdiploid myeloma; integromics; miRNA; microRNA; multiple myeloma; transcription factors.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Diploidy
  • Gene Expression
  • Gene Expression Regulation, Neoplastic
  • Humans
  • MicroRNAs / genetics*
  • Models, Genetic
  • Multiple Myeloma / genetics*
  • Multiple Myeloma / metabolism
  • RNA, Messenger / genetics
  • Transcription Factors / genetics*

Substances

  • MicroRNAs
  • RNA, Messenger
  • Transcription Factors