Draft genomes of gammaproteobacterial methanotrophs isolated from terrestrial ecosystems

Richard Hamilton; K Dimitri Kits; Victoria A Ramonovskaya; Olga N Rozova; Hiroya Yurimoto; Hiroyuki Iguchi; Valentina N Khmelenina; Yasuyoshi Sakai; Peter F Dunfield; Martin G Klotz; Claudia Knief; Huub J M Op den Camp; Mike S M Jetten; Françoise Bringel; Stéphane Vuilleumier; Mette M Svenning; Nicole Shapiro; Tanja Woyke; Yuri A Trotsenko; Lisa Y Stein; Marina G Kalyuzhnaya

doi:10.1128/genomeA.00515-15

Draft genomes of gammaproteobacterial methanotrophs isolated from terrestrial ecosystems

Genome Announc. 2015 Jun 4;3(3):e00515-15. doi: 10.1128/genomeA.00515-15.

Authors

Richard Hamilton¹, K Dimitri Kits², Victoria A Ramonovskaya³, Olga N Rozova⁴, Hiroya Yurimoto⁵, Hiroyuki Iguchi⁵, Valentina N Khmelenina⁴, Yasuyoshi Sakai⁵, Peter F Dunfield⁶, Martin G Klotz⁷, Claudia Knief⁸, Huub J M Op den Camp⁹, Mike S M Jetten⁹, Françoise Bringel¹⁰, Stéphane Vuilleumier¹⁰, Mette M Svenning¹¹, Nicole Shapiro¹², Tanja Woyke¹², Yuri A Trotsenko⁴, Lisa Y Stein², Marina G Kalyuzhnaya¹³

Affiliations

¹ San Diego State University, San Diego, California, USA.
² Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada.
³ Department of Biology of Extremophilic Microorganisms, Institute of Microbiology and Virology of National Academy of Science, Kyiv, Ukraine.
⁴ GK Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, Pushchino, Russia.
⁵ Division of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kitashirakawa-Oiwake, Sakyo-ku, Japan.
⁶ Department of Biological Sciences, University of Calgary, Calgary, Alberta, Canada.
⁷ Department of Biological Sciences, University of North Carolina, Charlotte, North Carolina, USA.
⁸ Institute of Crop Science and Resource Conservation-Molecular Biology of the Rhizosphere, University of Bonn, Bonn, Germany.
⁹ Department of Microbiology, Faculty of Science, Radboud University, Nijmegen, The Netherlands.
¹⁰ Department of Microbiology, Genomics and the Environment, Université de Strasbourg, CNRS, Strasbourg, France.
¹¹ Department of Arctic and Marine Biology, UiT The Arctic University of Norway, Tromsø, Norway.
¹² DOE Joint Genome Institute, Walnut Creek, California, USA.
¹³ San Diego State University, San Diego, California, USA mkalyuzhnaya@mail.sdsu.edu.

Abstract

Genome sequences of Methylobacter luteus, Methylobacter whittenburyi, Methylosarcina fibrata, Methylomicrobium agile, and Methylovulum miyakonense were generated. The strains represent aerobic methanotrophs typically isolated from various terrestrial ecosystems.