In situ analysis of epigenetic modifications in the chromatin of Brachypodium distachyon embryos

Plant Signal Behav. 2015;10(5):e1011948. doi: 10.1080/15592324.2015.1011948.

Abstract

Epigenetic modifications of the chromatin structure are crucial for many biological processes and act on genes during the development and germination of seeds. The spatial distribution of 3 epigenetic markers, i.e. H4K5ac, H3K4me2 and H3K4me1 was investigated in 'matured,' 'dry,' 'imbibed" and 'germinating' embryos of a model grass, Brachypodium. Our results indicate that the patterns of epigenetic modification differ in the various types of tissues of embryos that were analyzed. Such a tissue-specific manner of these modifications may be linked to the switch of the gene expression profiles in various organs of the developing embryo.

Keywords: B. distachyon; Brachypodium, Brachypodium distachyon; DAPI, 4′, 6 diamidino-2-phenylindole; H3K4me1; H3K4me1, histone H3 methylation at lysine 4; H3K4me2; H3K4me2, histone H4 dimethylation at lysine 4; H4K5ac; H4K5ac, histone H4 acetylation at lysine 5; Poaceae; RAM, root apical meristem; SAM, shoot apical meristem; chromatin; embryo; epigenetic modifications; immunostaining techniques; organ; tissue.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Brachypodium / genetics*
  • Brachypodium / metabolism
  • Chromatin / metabolism*
  • Epigenesis, Genetic*
  • Seeds / metabolism*

Substances

  • Chromatin