Characterization and identification of the proteins bound to two types of polyhydroxyalkanoate granules in Pseudomonas sp. 61-3

Biosci Biotechnol Biochem. 2015;79(8):1369-77. doi: 10.1080/09168451.2015.1023250. Epub 2015 May 14.

Abstract

Pseudomonas sp. 61-3 accumulates two types of polyhydroxyalkanoates (PHAs), poly(3-hydroxybutyrate) [P(3HB)], and poly(3HB-co-3-hydroxyalkanoates) [P(3HB-co-3HA)], and some proteins associated with their PHA granules have been identified. To date, PhaFPs (GA36) and PhaIPs (GA18) were identified from P(3HB-co-3HA) granules. In this study, the gene encoding GA24 associated with P(3HB) granule was identified as phbPPs. PhbPPs was composed of 192 amino acids with a calculated molecular mass of 20.4 kDa and was assumed to be a phasin. phbFPs gene and unknown ORF were also found on phb locus. PhbFPs was anticipated to be the transcriptional repressor of phbPPs gene. PhbPPs was bound to the P(3HB-co-3HA) granules with 3HB composition of more than 87 mol%, and PhaIPs and PhaFPs were bound to the P(3HB-co-3HA) granules with 3HA (C6-C12) composition of more than 13 mol% in the producing cells, suggesting that localization of these proteins is attributed to the monomer compositions of the copolymers.

Keywords: biodegradable plastics; phasin; polyhydroxyalkanoate (PHA); polyhydroxyalkanoate granule-associated protein.

MeSH terms

  • Bacterial Proteins / chemistry
  • Bacterial Proteins / isolation & purification
  • Bacterial Proteins / metabolism*
  • Hydroxybutyrates / chemistry
  • Hydroxybutyrates / metabolism*
  • Inclusion Bodies / chemistry
  • Inclusion Bodies / metabolism
  • Molecular Weight
  • Polyesters / chemistry
  • Polyesters / metabolism*
  • Polyhydroxyalkanoates / chemistry
  • Polyhydroxyalkanoates / metabolism*
  • Pseudomonas / metabolism*
  • Pseudomonas / pathogenicity

Substances

  • Bacterial Proteins
  • Hydroxybutyrates
  • Polyesters
  • Polyhydroxyalkanoates
  • poly-beta-hydroxybutyrate