Introgression of blast resistance genes into the elite rice variety MR263 through marker-assisted backcrossing

J Sci Food Agric. 2016 Mar 15;96(4):1297-305. doi: 10.1002/jsfa.7222. Epub 2015 May 27.

Abstract

Background: Blast caused by the fungus Magnaporthe oryzae is a significant disease threat to rice across the world and is especially prevalent in Malaysia. An elite, early-maturing, high-yielding Malaysian rice variety, MR263, is susceptible to blast and was used as the recurrent parent in this study. To improve MR263 disease resistance, the Pongsu Seribu 1 rice variety was used as donor of the blast resistance Pi-7(t), Pi-d(t)1 and Pir2-3(t) genes and qLN2 quantitative trait locus (QTL). The objective was to introgress these blast resistance genes into the background of MR263 using marker-assisted backcrossing with both foreground and background selection.

Results: Improved MR263-BR-3-2, MR263-BR-4-3, MR263-BR-13-1 and MR263-BR-26-4 lines carrying the Pi-7(t), Pi-d(t)1 and Pir2-3(t) genes and qLN2 QTL were developed using the simple sequence repeat (SSR) markers RM5961 and RM263 (linked to the blast resistance genes and QTL) for foreground selection and a collection of 65 polymorphic SSR markers for background selection in backcrossed and selfed generations. A background analysis revealed that the highest rate of recurrent parent genome recovery was 96.1% in MR263-BR-4-3 and 94.3% in MR263-BR-3-2.

Conclusion: The addition of blast resistance genes can be used to improve several Malaysian rice varieties to combat this major disease.

Keywords: Pi gene; blast resistance; molecular markers; rice.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA, Plant / analysis
  • Disease Resistance
  • Genes, Plant
  • Genetic Markers
  • Genotype
  • Inbreeding / methods*
  • Magnaporthe
  • Malaysia
  • Microsatellite Repeats
  • Oryza / genetics*
  • Oryza / microbiology*
  • Plant Diseases / genetics*
  • Plant Diseases / microbiology*
  • Plant Diseases / prevention & control
  • Species Specificity

Substances

  • DNA, Plant
  • Genetic Markers