Rotavirus strain surveillance for three years following the introduction of rotavirus vaccine into Belém, Brazil

J Med Virol. 2015 Aug;87(8):1303-10. doi: 10.1002/jmv.24183. Epub 2015 Apr 16.

Abstract

The monovalent human rotavirus (RV) vaccine, RIX4414 (Rotarix™, GlaxoSmithKline Biologicals) was introduced into Brazil's Expanded Program on Immunization in March 2006. One year after vaccine introduction, the G2P[4] strain was found to be predominant, with an apparent extinction of many non-G2 strains. This study investigated the diversity of circulating strains in the three years following RIX4414 introduction. Between May 2008 and May 2011, stool samples were collected from children aged ≥12 weeks who were hospitalized for severe lab confirmed RV-gastroenteritis (≥3 liquid or semi-liquid motions over a 24-h period for <14 days, requiring ≥1 overnight hospital stay and intravenous rehydration therapy) in Belém, Brazil. RV-gastroenteritis was detected by ELISA and the G- and P-types were determined by RT-PCR assays. During the first year of surveillance nucleotide sequencing was used for typing those samples not previously typed by RT-PCR. A total of 1,726 of 10,030 severe gastroentertis hospitalizations (17.2%) were due to severe RVGE. G2P[4] was detected in 57.2% of circulating strains over the whole study period, however it predominated during the first 20 months from May 2008 to January 2009. G1P[8] increased in the last part of the study period from May 2010 to May 2011 and represented 36.6% (112/306) of the circulating strains. G2P[4] was the predominant RV strain circulating during the first 20 months of the study, followed by G1P[8]. These findings probably reflect a natural fluctuation in RV strains over time, rather than a vaccine-induced selective pressure.

Keywords: Belém, Brazil; gastroenteritis; genotypes; post-vaccination; rotavirus.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Brazil / epidemiology
  • Case-Control Studies
  • Child, Preschool
  • Epidemiological Monitoring
  • Feces / virology
  • Female
  • Gastroenteritis / epidemiology
  • Gastroenteritis / prevention & control
  • Gastroenteritis / virology
  • Genetic Variation*
  • Genotype*
  • Humans
  • Infant
  • Male
  • Molecular Epidemiology
  • RNA, Viral / genetics
  • Reverse Transcriptase Polymerase Chain Reaction
  • Rotavirus / classification*
  • Rotavirus / genetics*
  • Rotavirus / isolation & purification
  • Rotavirus Infections / epidemiology*
  • Rotavirus Infections / prevention & control*
  • Rotavirus Infections / virology
  • Rotavirus Vaccines / administration & dosage*
  • Sequence Analysis, DNA
  • Vaccines, Attenuated / administration & dosage

Substances

  • RIX4414 vaccine
  • RNA, Viral
  • Rotavirus Vaccines
  • Vaccines, Attenuated