SRSF1 RNA Recognition Motifs Are Strong Inhibitors of HIV-1 Replication

J Virol. 2015 Jun;89(12):6275-86. doi: 10.1128/JVI.00693-15. Epub 2015 Apr 8.

Abstract

Replication of the integrated HIV-1 genome is tightly regulated by a series of cellular factors. In previous work we showed that transactivation of the HIV-1 promoter is regulated by the cellular splicing factor SRSF1. Here we report that SRSF1 can downregulate the replication of B, C, and D subtype viruses by >200-fold in a cell culture system. We show that viral transcription and splicing are inhibited by SRSF1 expression. Furthermore, SRSF1 deletion mutants containing the protein RNA-binding domains but not the arginine serine-rich activator domain can downregulate viral replication by >2,000-fold with minimal impact on cell viability and apoptosis. These data suggest a therapeutic potential for SRSF1 and its RNA-binding domains.

Importance: Most drugs utilized to treat the HIV-1 infection are based on compounds that directly target proteins encoded by the virus. However, given the high viral mutation rate, the appearance of novel drug-resistant viral strains is common. Thus, there is a need for novel therapeutics with diverse mechanisms of action. In this study, we show that the cellular protein SRSF1 is a strong inhibitor of viral replication. Furthermore, expression of the SRSF1 RNA-binding domains alone can inhibit viral replication by >2,000-fold in multiple viral strains without impacting cell viability. Given the strong antiviral properties of this protein, the RNA-binding domains, and the minimal effects observed on cell metabolism, further studies are warranted to assess the therapeutic potential of peptides derived from these sequences.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antiviral Agents / metabolism
  • Cell Line
  • DNA Mutational Analysis
  • HIV-1 / immunology*
  • HIV-1 / physiology*
  • Host-Pathogen Interactions*
  • Humans
  • Nuclear Proteins / metabolism*
  • RNA Splicing
  • RNA, Viral / metabolism*
  • RNA-Binding Proteins / metabolism*
  • Serine-Arginine Splicing Factors
  • Transcription, Genetic
  • Virus Replication*

Substances

  • Antiviral Agents
  • Nuclear Proteins
  • RNA, Viral
  • RNA-Binding Proteins
  • Serine-Arginine Splicing Factors