ISOB: A Database of Indigenous Snake Species of Bangladesh with respective known venom composition

Bioinformation. 2015 Feb 28;11(2):107-14. doi: 10.6026/97320630011107. eCollection 2015.

Abstract

At present there is no well structured database available for the venomous snakes and venom composition of snakes in the world although venom has immense importance in biomedical research. Searching for a specific venom component from NCBI, PDB or public databases is troublesome, because they contain huge amount of data entries. Therefore, we created a database named "ISOB" which is a web accessible unique secondary database that represents the first online available bioinformatics resource showing venom composition of snakes. This database provides a comprehensive overview of seventy-eight indigenous snake species covering description of snakes supplemented with structural information of the relevant individual available venom proteins. We strongly believe that this database will contribute significantly in the field of bioinformatics, environmental research, proteomics, drug development and rationale drug designing.

Availability: The database is freely available at http://www.snakebd.com/.

Keywords: 3D structure; Bangladesh; Database; Indigenous snakes; Snake venom.