Phylogenetic relationships among four new complete mitogenome sequences of Pelophylax (Amphibia: Anura) from the Balkans and Cyprus

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Sep;27(5):3434-7. doi: 10.3109/19401736.2015.1025266. Epub 2015 Mar 25.

Abstract

We present the full-length mitogenome sequences of four European water frog species: Pelophylax cypriensis, P. epeiroticus, P. kurtmuelleri and P. shqipericus. The mtDNA size varied from 17,363 to 17,895 bp, and its organization with the LPTF tRNA gene cluster preceding the 12 S rRNA gene displayed the typical Neobatrachian arrangement. Maximum likelihood and Bayesian inference revealed a well-resolved mtDNA phylogeny of seven European Pelophylax species. The uncorrected p-distance for among Pelophylax mitogenomes was 9.6 (range 0.01-0.13). Most divergent was the P. shqipericus mitogenome, clustering with the "P. lessonae" group, in contrast to the other three new Pelophylax mitogenomes related to the "P. bedriagae/ridibundus" lineage. The new mitogenomes resolve ambiguities of the phylogenetic placement of P. cretensis and P. epeiroticus.

Keywords: mtDNA; phylogeography; water frogs.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Anura / genetics
  • Balkan Peninsula
  • Base Composition
  • Cyprus
  • Gene Order
  • Genes, rRNA
  • Genome Size
  • Genome, Mitochondrial*
  • Mitochondria / genetics*
  • NADH Dehydrogenase / genetics
  • Phylogeny
  • RNA, Transfer / genetics
  • Sequence Analysis, DNA / methods*

Substances

  • RNA, Transfer
  • NADH Dehydrogenase