The impact of companion diagnostic device measurement performance on clinical validation of personalized medicine

Stat Med. 2015 Jun 30;34(14):2222-34. doi: 10.1002/sim.6476. Epub 2015 Mar 16.

Abstract

A key component of personalized medicine is companion diagnostics that measure biomarkers, for example, protein expression, gene amplification or specific mutations. Most of the recent attention concerning molecular cancer diagnostics has been focused on the biomarkers of response to therapy, such as V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog (KRAS) mutations in metastatic colorectal cancer, epidermal growth factor receptor mutations in metastatic malignant melanoma. The presence or absence of these markers is directly linked to the response rates of particular targeted therapies with small-molecule kinase inhibitors or antibodies. Therefore, testing for these markers has become a critical step in the target therapy of the aforementioned tumors. The core capability of personalized medicine is the companion diagnostic devices' (CDx) ability to accurately and precisely stratify patients by their likelihood of benefit (or harm) from a particular therapy. There is no reference in the literature discussing the impact of device's measurement performance, for example, analytical accuracy and precision on treatment effects, variances, and sample sizes of clinical trial for the personalized medicine. In this paper, using both analytical and estimation method, we assessed the impact of CDx measurement performance as a function of positive and negative predictive values and imprecision (standard deviation) on treatment effects, variances of clinical outcome, and sample sizes for the clinical trials.

Keywords: analytical accuracy; biomarker; clinical validation trial; companion diagnostic device; imprecision; positive and negative percentage agreements; positive and negative predictive values.

MeSH terms

  • Alzheimer Disease / drug therapy
  • Alzheimer Disease / genetics
  • Apolipoprotein E4 / analysis
  • Apolipoprotein E4 / genetics
  • Clinical Trials as Topic / methods*
  • Clinical Trials as Topic / statistics & numerical data
  • Early Diagnosis
  • Genetic Markers*
  • Genetic Predisposition to Disease
  • Humans
  • Likelihood Functions
  • Molecular Biology / methods*
  • Molecular Biology / statistics & numerical data
  • Outcome Assessment, Health Care / methods*
  • Outcome Assessment, Health Care / statistics & numerical data
  • Precision Medicine / methods*
  • Precision Medicine / statistics & numerical data
  • Reproducibility of Results
  • Risk Factors
  • Secondary Prevention

Substances

  • Apolipoprotein E4
  • Genetic Markers