Investigating transcription reinitiation through in vitro approaches

Transcription. 2014;5(1):e27704. doi: 10.4161/trns.27704.

Abstract

By influencing the number of RNA molecules repeatedly synthesized from the same gene, the control of transcription reinitiation has the potential to shape the transcriptome. Transcription reinitiation mechanisms have been mainly addressed in vitro, through approaches based on both crude and reconstituted systems. These studies support the notion that transcription reinitiation and its regulation rely on dedicated networks of molecular interactions within transcription machineries. At the same time, comparison with in vivo transcription rates suggests that additional mechanisms, factors and conditions must exist in the nucleus, whose biochemical elucidation is a fascinating challenge for future in vitro transcription studies.

Keywords: RNA polymerase; chromatin template; in vitro transcription; reinitiation; template competition; termination.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Models, Genetic*
  • RNA / biosynthesis*
  • RNA Polymerase I / metabolism
  • RNA Polymerase I / physiology
  • RNA Polymerase II / metabolism
  • RNA Polymerase II / physiology
  • RNA Polymerase III / metabolism
  • RNA Polymerase III / physiology
  • Transcription Initiation, Genetic / physiology*
  • Transcription Termination, Genetic
  • Transcription, Genetic

Substances

  • RNA
  • RNA Polymerase II
  • RNA Polymerase I
  • RNA Polymerase III