DYn-2 Based Identification of Arabidopsis Sulfenomes

Mol Cell Proteomics. 2015 May;14(5):1183-200. doi: 10.1074/mcp.M114.046896. Epub 2015 Feb 18.

Abstract

Identifying the sulfenylation state of stressed cells is emerging as a strategic approach for the detection of key reactive oxygen species signaling proteins. Here, we optimized an in vivo trapping method for cysteine sulfenic acids in hydrogen peroxide (H2O2) stressed plant cells using a dimedone based DYn-2 probe. We demonstrated that DYn-2 specifically detects sulfenylation events in an H2O2 dose- and time-dependent way. With mass spectrometry, we identified 226 sulfenylated proteins after H2O2 treatment of Arabidopsis cells, residing in the cytoplasm (123); plastid (68); mitochondria (14); nucleus (10); endoplasmic reticulum, Golgi and plasma membrane (7) and peroxisomes (4). Of these, 123 sulfenylated proteins have never been reported before to undergo cysteine oxidative post-translational modifications in plants. All in all, with this DYn-2 approach, we have identified new sulfenylated proteins, and gave a first glance on the locations of the sulfenomes of Arabidopsis thaliana.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arabidopsis / drug effects
  • Arabidopsis / genetics
  • Arabidopsis / metabolism*
  • Arabidopsis Proteins / analysis*
  • Arabidopsis Proteins / genetics
  • Arabidopsis Proteins / metabolism
  • Avidin / chemistry
  • Biotin / chemistry
  • Cell Compartmentation
  • Cell Culture Techniques
  • Cyclohexanones / chemistry*
  • Hydrogen Peroxide / metabolism
  • Hydrogen Peroxide / pharmacology
  • Molecular Probes / chemistry*
  • Molecular Sequence Annotation
  • Organelles / drug effects
  • Organelles / metabolism
  • Oxidation-Reduction
  • Oxidative Stress
  • Protein Processing, Post-Translational*
  • Proteomics / methods
  • Signal Transduction
  • Sulfenic Acids / chemistry
  • Sulfenic Acids / metabolism*

Substances

  • Arabidopsis Proteins
  • Cyclohexanones
  • Molecular Probes
  • Sulfenic Acids
  • Avidin
  • Biotin
  • dimedone
  • Hydrogen Peroxide