HypE-specific nanobodies as tools to modulate HypE-mediated target AMPylation

J Biol Chem. 2015 Apr 3;290(14):9087-100. doi: 10.1074/jbc.M114.634287. Epub 2015 Feb 12.

Abstract

The covalent addition of mono-AMP to target proteins (AMPylation) by Fic domain-containing proteins is a poorly understood, yet highly conserved post-translational modification. Here, we describe the generation, evaluation, and application of four HypE-specific nanobodies: three that inhibit HypE-mediated target AMPylation in vitro and one that acts as an activator. All heavy chain-only antibody variable domains bind HypE when expressed as GFP fusions in intact cells. We observed localization of HypE at the nuclear envelope and further identified histones H2-H4, but not H1, as novel in vitro targets of the human Fic protein. Its role in histone modification provides a possible link between AMPylation and regulation of gene expression.

Keywords: AMPylation; Fic Proteins; Histone Modification; HypE; Nuclear Membrane; Phage Display; Post-translational Modification (PTM); Recombinant Protein Expression; VHHs.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Monophosphate / metabolism*
  • Amino Acid Sequence
  • Carrier Proteins / chemistry
  • Carrier Proteins / metabolism*
  • Cell Line
  • Flow Cytometry
  • Humans
  • Membrane Proteins / chemistry
  • Membrane Proteins / metabolism*
  • Molecular Sequence Data
  • Nucleotidyltransferases
  • Sequence Homology, Amino Acid
  • Single-Domain Antibodies / metabolism*

Substances

  • Carrier Proteins
  • Membrane Proteins
  • Single-Domain Antibodies
  • Adenosine Monophosphate
  • FICD protein, human
  • Nucleotidyltransferases