Evidence for ProTα-TLR4/MD-2 binding: molecular dynamics and gravimetric assay studies

Expert Opin Biol Ther. 2015:15 Suppl 1:S223-9. doi: 10.1517/14712598.2015.1005597. Epub 2015 Jan 21.

Abstract

Objective: During preconditioning, lipopolysaccharide (LPS) selectively activates TLR4/MD-2/Toll/IL-1 receptor-domain-containing adaptor inducing IFN-β (TRIF) pathway instead of pro-inflammatory myeloid differentiation protein-88 (MyD88)/MyD88-adaptor-like protein (MAL) pathway. Extracellular prothymosin alpha (ProTα) is also known to selectively activate the TLR4/MD2/TRIF-IRF3 pathway in certain diseased conditions. In the current study, biophysical evidence for ProTα/TLR4/MD-2 complex formation and its interaction dynamics have been studied.

Research design and methods: Gravimetric assay was used to investigate ProTα/TLR4/MD-2 complex formation while molecular dynamics (MD) simulation was used to study its interaction dynamics.

Results: Through electrostatic interaction, full-length ProTα (F-ProTα) C-terminal peptide (aa 91 - 111) superficially interacts with similar TLR4/MD-2 (KD = 273.36 nm vs 16.07 μg/ml [LPS]) conformation with LPS at an overlapping three-dimensional space while F-ProTα is hinged to the TLR4 scaffold by one-amino acid shift-Mosoian domain (aa-51 - 90). Comparatively, F-ProTα better stabilizes MD-2 metastable states transition and mediates higher TLR4/MD-2 interaction than LPS.

Conclusions: ProTα via its C-terminal peptide (aa 91 - 111) exhibits in vitro biophysical contact with TLR4/MD-2 complex conformation recognized by LPS at overlapping LPS-binding positions.

Keywords: Toll-like receptor 4; gravimetric analysis; lipopolysaccharide; molecular dynamics simulation; prothymosin alpha.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Chemistry Techniques, Analytical
  • Humans
  • Interferon Regulatory Factor-3 / chemistry
  • Interferon Regulatory Factor-3 / metabolism
  • Interleukin-6 / chemistry
  • Interleukin-6 / metabolism
  • Lymphocyte Antigen 96 / chemistry*
  • Lymphocyte Antigen 96 / metabolism*
  • Mice
  • Models, Molecular
  • Molecular Dynamics Simulation
  • Molecular Sequence Data
  • Protein Binding
  • Protein Precursors / chemistry*
  • Protein Precursors / metabolism*
  • Receptors, Interleukin-1 / chemistry
  • Receptors, Interleukin-1 / metabolism
  • Signal Transduction
  • Thymosin / analogs & derivatives*
  • Thymosin / chemistry
  • Thymosin / metabolism
  • Toll-Like Receptor 4 / chemistry*
  • Toll-Like Receptor 4 / metabolism*

Substances

  • IRF3 protein, human
  • Interferon Regulatory Factor-3
  • Interleukin-6
  • LY96 protein, human
  • Lymphocyte Antigen 96
  • Protein Precursors
  • Receptors, Interleukin-1
  • Toll-Like Receptor 4
  • prothymosin alpha
  • Thymosin