Extra tyrosine in the carbohydrate-binding module of Irpex lacteus Xyn10B enhances its cellulose-binding ability

Biosci Biotechnol Biochem. 2015;79(5):738-46. doi: 10.1080/09168451.2014.996203. Epub 2015 Jan 3.

Abstract

The xylanase (Xyn10B) that strongly adsorbs on microcrystalline cellulose was isolated from Driselase. The Xyn10B contains a Carbohydrate-binding module family 1 (CBM1) (IrpCBMXyn10B) at N-terminus. The canonical essential aromatic residues required for cellulose binding were conserved in IrpCBMXyn10B; however, its adsorption ability was markedly higher than that typically observed for the CBM1 of an endoglucanase from Trametes hirsuta (ThCBMEG1). An analysis of the CBM-GFP fusion proteins revealed that the binding capacity to cellulose (7.8 μmol/g) and distribution coefficient (2.0 L/μmol) of IrpCBMXyn10B-GFP were twofold higher than those of ThCBMEG1-GFP (3.4 μmol/g and 1.2 L/μmol, respectively), used as a reference structure. Besides the canonical aromatic residues (W24-Y50-Y51) of typical CBM1-containing proteins, IrpCBMXyn10B had an additional aromatic residue (Y52). The mutation of Y52 to Ser (IrpCBMY52S-GFP) reduced these adsorption parameters to 4.4 μmol/g and 1.5 L/μmol, which were similar to those of ThCBMEG1-GFP. These results indicate that Y52 plays a crucial role in strong cellulose binding.

Keywords: Irpex lacteus; carbohydrate-binding module family 1; glycoside hydrolase family 10 xylanase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Basidiomycota / enzymology*
  • Binding Sites
  • Cellulose / chemistry
  • Cellulose / metabolism
  • Chemical Fractionation
  • Cotton Fiber
  • Endo-1,4-beta Xylanases / chemistry*
  • Endo-1,4-beta Xylanases / genetics
  • Endo-1,4-beta Xylanases / metabolism*
  • Fungal Proteins / chemistry
  • Fungal Proteins / metabolism
  • Glycoside Hydrolases / chemistry
  • Glycoside Hydrolases / metabolism
  • Green Fluorescent Proteins / genetics
  • Green Fluorescent Proteins / metabolism
  • Molecular Sequence Data
  • Mutation
  • Recombinant Fusion Proteins / genetics
  • Recombinant Fusion Proteins / metabolism
  • Tyrosine / metabolism*

Substances

  • Fungal Proteins
  • Recombinant Fusion Proteins
  • Green Fluorescent Proteins
  • Tyrosine
  • Cellulose
  • Glycoside Hydrolases
  • driselase
  • Endo-1,4-beta Xylanases