Typing of human rhinoviruses based on sequence variations in the 5' non-coding region

J Gen Virol. 1989 Nov:70 ( Pt 11):3111-6. doi: 10.1099/0022-1317-70-11-3111.

Abstract

Unambiguous assignment of restriction enzyme patterns to six individual serotypes of human rhinovirus was accomplished after amplification of a 380 bp DNA fragment derived from the 5' non-coding region. This was possible even though serotypes 1A and 1B and serotypes 2 and 49 differed only at 10 and 15 positions respectively. The method utilizes the conserved and variable components of this part of the genome and provides the basis for a simple and rapid method for typing of human rhinoviruses.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • DNA, Viral / genetics
  • Gene Amplification
  • Molecular Sequence Data
  • RNA, Viral / genetics
  • Restriction Mapping
  • Rhinovirus / classification*
  • Rhinovirus / genetics
  • Serotyping

Substances

  • DNA, Viral
  • RNA, Viral