Complete mitochondrial genome of the Sharpnose stingray Himantura gerrardi (Myliobatiformes: Dasyatidae)

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):3989-3990. doi: 10.3109/19401736.2014.989518. Epub 2014 Dec 29.

Abstract

In this study, we presented the complete mitochondrial genome of the Sharpnose stingray Himantura gerrardi for the first time, which was 17,685 bp in length and contained 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes and a putative control region. The overall nucleotide composition was 30.1% A, 27.5% C, 14.5% G and 28.0% T. A total of 22 bp overlaps and 83 bp short intergenic spaces were found in the mitogenome. Two start codons (ATG and GTG) and two stop codons (TAG and TAA/T) were used in the protein-coding genes. The origin of L-strand replication (OL) sequence formed a hairpin structure between the tRNA-Asn and tRNA-Cys genes. The termination associated sequence (TAS) formed a hairpin structure near the tRNA-Pro in the control region.

Keywords: Mitogenome; Myliobatiformes; stingray.

MeSH terms

  • Animals
  • Base Composition
  • Codon, Initiator
  • Codon, Terminator
  • Evolution, Molecular
  • Gene Order*
  • Genes, Mitochondrial*
  • Genome Size
  • Genome, Mitochondrial*
  • Sequence Analysis, DNA
  • Skates, Fish / genetics*

Substances

  • Codon, Initiator
  • Codon, Terminator