CSB interacts with SNM1A and promotes DNA interstrand crosslink processing

Nucleic Acids Res. 2015 Jan;43(1):247-58. doi: 10.1093/nar/gku1279. Epub 2014 Dec 10.

Abstract

Cockayne syndrome (CS) is a premature aging disorder characterized by photosensitivity, impaired development and multisystem progressive degeneration, and consists of two strict complementation groups, A and B. Using a yeast two-hybrid approach, we identified the 5'-3' exonuclease SNM1A as one of four strong interacting partners of CSB. This direct interaction was confirmed using purified recombinant proteins-with CSB able to modulate the exonuclease activity of SNM1A on oligonucleotide substrates in vitro-and the two proteins were shown to exist in a common complex in human cell extracts. CSB and SNM1A were also found, using fluorescently tagged proteins in combination with confocal microscopy and laser microirradiation, to be recruited to localized trioxsalen-induced ICL damage in human cells, with accumulation being suppressed by transcription inhibition. Moreover, SNM1A recruitment was significantly reduced in CSB-deficient cells, suggesting coordination between the two proteins in vivo. CSB-deficient neural cells exhibited increased sensitivity to DNA crosslinking agents, particularly, in a non-cycling, differentiated state, as well as delayed ICL processing as revealed by a modified Comet assay and γ-H2AX foci persistence. The results indicate that CSB coordinates the resolution of ICLs, possibly in a transcription-associated repair mechanism involving SNM1A, and that defects in the process could contribute to the post-mitotic degenerative pathologies associated with CS.

Publication types

  • Research Support, N.I.H., Intramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Cycle Proteins
  • Cell Line
  • Cross-Linking Reagents
  • DNA / metabolism
  • DNA Damage
  • DNA Helicases / metabolism*
  • DNA Repair Enzymes / metabolism*
  • DNA Repair*
  • DNA-Binding Proteins / metabolism*
  • Exodeoxyribonucleases
  • Exonucleases / metabolism
  • HeLa Cells
  • Humans
  • Poly-ADP-Ribose Binding Proteins

Substances

  • Cell Cycle Proteins
  • Cross-Linking Reagents
  • DNA-Binding Proteins
  • Poly-ADP-Ribose Binding Proteins
  • DNA
  • DCLRE1A protein, human
  • Exodeoxyribonucleases
  • Exonucleases
  • DNA Helicases
  • ERCC6 protein, human
  • DNA Repair Enzymes