Roseimaritima ulvae gen. nov., sp. nov. and Rubripirellula obstinata gen. nov., sp. nov. two novel planctomycetes isolated from the epiphytic community of macroalgae

Syst Appl Microbiol. 2015 Feb;38(1):8-15. doi: 10.1016/j.syapm.2014.10.004. Epub 2014 Oct 24.

Abstract

Four isolates, belonging to the deep-branching phylum Planctomycetes, were recovered from the biofilm of two marine macroalgae, Ulva sp. and Laminaria sp., from the Northern coast of Portugal. These strains were light pink- or red-pigmented; the cells were variable in shape and usually organized in rosettes. They had a dimorphic cell cycle with budding reproduction. The organisms were chemoheterotrophic, strictly aerobic and mesophilic. The 16S rRNA gene sequence analysis showed that the strains belong to the family Planctomycetaceae with Rhodopirellula as the closest genus. The isolates form two separate branches (strain LF1(T) forms one branch and the strains UC8(T), UF3 and UF42 form a second branch) clearly separated from Rhodopirellula baltica with 94.2% and 93.8% 16S rRNA gene sequence similarity, respectively. Based on differential characteristics that distinguish the novel genera from R. baltica, such as cell size and shape, ultrastructure, enzymatic activities, substrate utilization pattern, fatty acid composition, phospholipid profiles and phylogeny we propose that the isolates represent two novel genera of the order Planctomycetales, Roseimaritima ulvae gen. nov., sp. nov. (type strain is UC8(T)=DSM 25454(T)=LMG 27778(T)) and Rubripirellula obstinata gen. nov., sp. nov. (type strain is LF1(T)=LMG 27779(T)=CECT 8602(T)).

Keywords: Biofilm; Macroalgae; New taxa; Planctomycetes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / metabolism
  • Base Composition
  • DNA, Bacterial / genetics
  • Molecular Sequence Data
  • Molecular Typing
  • Phylogeny
  • Planctomycetales / enzymology
  • Planctomycetales / genetics
  • Planctomycetales / isolation & purification*
  • Planctomycetales / ultrastructure
  • RNA, Ribosomal, 16S / genetics
  • Seawater / microbiology
  • Seaweed / enzymology
  • Seaweed / genetics
  • Seaweed / isolation & purification*
  • Seaweed / ultrastructure
  • Sequence Analysis, DNA
  • Water Microbiology

Substances

  • Bacterial Proteins
  • DNA, Bacterial
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/DQ986201
  • GENBANK/HQ845508
  • GENBANK/HQ845532
  • GENBANK/HQ845534