Complete mitochondrial genome of Danio myersi (Teleostei: Cypriniformes: Cyprinidae)

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):3913-3914. doi: 10.3109/19401736.2014.987262. Epub 2014 Dec 8.

Abstract

The complete mitochondrial genome (mitogenome) of Danio myersi (Teleostei: Cypriniformes: Cyprinidae) has been sequenced, and it is a circular molecule of 16,565 bp in length and contains the typical complement of 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes and 12 non-coding regions. The order and orientation of the genes are identical to the typical arrangement in vertebrates, and most of the genes were encoded on the H-strand except for ND6 and eight tRNA genes. The AT content of the overall base composition of H-strand is 63.4% (T, 26.8%; C, 25.3%; A, 31.6%; G, 16.4%) and the length of control region is 925 bp with 65.5% AT content. The mitogenome sequenced in the present study will be an important step forward in completely resolving phylogenetic relationships of the subfamily Danioninae in the future.

Keywords: Cyprinidae; Danio myersi; Danioninae; mitochondrial genome.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Composition
  • Codon, Initiator
  • Codon, Terminator
  • Cyprinidae / classification
  • Cyprinidae / genetics*
  • DNA, Mitochondrial / chemistry
  • DNA, Mitochondrial / isolation & purification
  • DNA, Mitochondrial / metabolism
  • Fish Proteins / chemistry
  • Fish Proteins / genetics
  • Genome, Mitochondrial*
  • Open Reading Frames / genetics
  • Phylogeny
  • RNA, Ribosomal / chemistry
  • RNA, Ribosomal / genetics
  • RNA, Transfer / chemistry
  • RNA, Transfer / genetics
  • Sequence Analysis, DNA

Substances

  • Codon, Initiator
  • Codon, Terminator
  • DNA, Mitochondrial
  • Fish Proteins
  • RNA, Ribosomal
  • RNA, Transfer