Positional cloning of the sex-linked giant egg (Ge) locus in the silkworm, Bombyx mori

Insect Mol Biol. 2015 Apr;24(2):213-21. doi: 10.1111/imb.12150. Epub 2014 Dec 3.

Abstract

The giant egg (Ge) locus is a Z-linked mutation that leads to the production of large eggs. Cytological observations suggest that an unusual translocation of a large fragment of the W chromosome bearing a putative egg size-determining gene, Esd, gave rise to giant egg mutants. However, there is currently no molecular evidence confirming either a W-Z translocation or the presence of Esd on the W chromosome. To elucidate the origin of giant egg mutants, we performed positional cloning. We observed that the Bombyx mori. orthologue of the human Phytanoyl-CoA dioxygenase domain containing 1 gene (PHYHD1) is disrupted in giant egg mutants. PHYHD1 is highly conserved in eukaryotes and is predicted to be a Fe(II) and 2-oxoglutarate-dependent oxygenase. Exon skipping in one of the two available Ge mutants is probably caused by the insertion of a non-long terminal repeat transposon into intron 4 in the vicinity of the 5' splice site. Segmental duplication in Ge(2) , an independent allele, was caused by unequal recombination between short interspersed elements inserted into introns 3 and 5. Our results indicate that (1) Bombyx PHYHD1 is responsible for the Ge mutants and that (2) the Ge locus is unrelated to the W-linked putative Esd. To our knowledge, this is the first report describing the phenotypic defects caused by mutations in PHYHD1 orthologues.

Keywords: 2-oxoglutarate-dependent oxygenase; dosage effect; egg size; oogenesis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence
  • Bombyx / genetics*
  • Chromosome Mapping
  • Cloning, Molecular
  • Female
  • Genetic Loci*
  • Genetic Techniques
  • Molecular Sequence Data
  • Mutation
  • Oogenesis / genetics
  • Ovum / cytology
  • Sex Chromosomes / genetics*

Associated data

  • GENBANK/AB926418
  • GENBANK/AB926419
  • GENBANK/AB926421
  • GENBANK/AB926422
  • GENBANK/AB926423
  • GENBANK/AB926424