Natural photoreceptors and their application to synthetic biology

Trends Biotechnol. 2015 Feb;33(2):80-91. doi: 10.1016/j.tibtech.2014.10.007. Epub 2014 Nov 12.

Abstract

The ability to perturb living systems is essential to understand how cells sense, integrate, and exchange information, to comprehend how pathologic changes in these processes relate to disease, and to provide insights into therapeutic points of intervention. Several molecular technologies based on natural photoreceptor systems have been pioneered that allow distinct cellular signaling pathways to be modulated with light in a temporally and spatially precise manner. In this review, we describe and discuss the underlying design principles of natural photoreceptors that have emerged as fundamental for the rational design and implementation of synthetic light-controlled signaling systems. Furthermore, we examine the unique challenges that synthetic protein technologies face when applied to the study of neural dynamics at the cellular and network level.

Keywords: optogenetics; photoreceptor; protein engineering; signal transduction; synthetic biology.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Arabidopsis Proteins / chemistry
  • Arabidopsis Proteins / genetics
  • Arabidopsis Proteins / metabolism
  • Bacteria / chemistry
  • Bacteria / metabolism
  • Bacteria / radiation effects
  • Bacteriorhodopsins / chemistry*
  • Bacteriorhodopsins / genetics
  • Bacteriorhodopsins / metabolism
  • Fungal Proteins / chemistry
  • Fungal Proteins / genetics
  • Fungal Proteins / metabolism
  • Gene Expression
  • Humans
  • Ion Transport
  • Light
  • Light Signal Transduction
  • Optogenetics / instrumentation
  • Optogenetics / methods*
  • Phototropins / chemistry*
  • Phototropins / genetics
  • Phototropins / metabolism
  • Phytochrome / chemistry*
  • Phytochrome / genetics
  • Phytochrome / metabolism
  • Plants / chemistry
  • Plants / metabolism
  • Plants / radiation effects
  • Synthetic Biology / methods*
  • Thermodynamics

Substances

  • Arabidopsis Proteins
  • Fungal Proteins
  • Phototropins
  • VVD protein, Neurospora crassa
  • ZTL protein, Arabidopsis
  • Phytochrome
  • Bacteriorhodopsins