SPRi determination of inter-peptide interaction by using 3D supramolecular co-assembly polyrotaxane film

Biosens Bioelectron. 2015 Apr 15:66:338-44. doi: 10.1016/j.bios.2014.11.025. Epub 2014 Nov 20.

Abstract

Accurate measurement of inter-peptide interactions is beneficial for in-depth understanding disease-related protein folding and peptide aggregation, and further for designing and selecting potential peptide drugs to the target antigen. Herein, we demonstrate a 3D polyrotaxane (PRX) surface for detecting peptides interactions by surface plasmon resonance imaging (SPRi). This surface is supramolecular self-assembly monolayer (SAM) structure fabricated by threading α-cyclodextrans (α-CD) through a linear polyethylene glycol (PEG) chain fixed on gold chip surface to form pseudopolyrotaxane, and further capping the pseudopolyrotaxane with bulky terminated group to form PRX film. The hydroxyl groups of α-CD can provide more active sites to increase molecules immobilization density, and PEG chain has unique protein non-fouling feature. We chose Alzheimer's disease marker β-amyloid 40 (Aβ40) as model peptide, and detected the interaction between it and its inhibitors KLVFFK6 by SPRi. As a striking result, the specific adsorption of KLVFFK6 solution at the concentration of 352μM on Aβ40-PRX was 700RU, whereas PEG SAM surface gave no significant binding. Interaction between other lower molecular weight peptides was detected via PRX surface, and the relatively weak interactions (KD=1.73×10(-4)M) between LPFFD (Mw=0.6kDa) and amylin20-29 (Mw=1.0kDa) are successfully detected.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Amyloid beta-Peptides / analysis
  • Amyloid beta-Peptides / metabolism*
  • Cyclodextrins / chemistry*
  • Equipment Design
  • Molecular Sequence Data
  • Peptide Fragments / analysis
  • Peptide Fragments / metabolism*
  • Peptides / analysis
  • Peptides / metabolism*
  • Poloxamer / chemistry*
  • Rotaxanes / chemistry*
  • Surface Plasmon Resonance / instrumentation*
  • Surface Properties

Substances

  • Amyloid beta-Peptides
  • Cyclodextrins
  • Peptide Fragments
  • Peptides
  • Rotaxanes
  • amyloid beta-protein (1-40)
  • polyrotaxane
  • Poloxamer