Falsirhodobacter deserti sp. nov., isolated from sandy soil

Int J Syst Evol Microbiol. 2015 Feb;65(Pt 2):650-655. doi: 10.1099/ijs.0.068262-0. Epub 2014 Nov 25.

Abstract

A Gram-stain-negative, non-motile, heterotrophic, rod-shaped bacterium, designated strain W402(T), was isolated from an enrichment culture of a Tamarix ramosissima rhizosphere soil sample from the Xinjiang desert in the PR China. Analysis of the almost-complete 16S rRNA gene sequence showed that the isolate was phylogenetically related to a species of the genus Falsirhodobacter, having a close relationship to Falsirhodobacter halotolerans JA744(T) (97 % similarity). However, DNA-DNA relatedness between W402(T) and F. halotolerans JA744(T) was 43.2±1.2 %. Strain W402(T) grew in 0-10 % (w/v) NaCl. The temperature and pH ranges for growth were 10-40 °C and pH 5.5-10.0, respectively. Optimal growth occurred at 1-3 % (w/v) NaCl, 30 °C and pH 7.0. The predominant cellular fatty acids were summed feature 8 (C18 : 1ω7c and/or C18 : 1ω6c, 61.4 %), C18 : 0 (9.8 %) and 11-methyl C18 : 1ω7c (8.2 %). The major quinone of strain W402(T) was Q-10. Phosphatidylethanolamine was predominant in the polar lipid profile. The DNA G+C content of strain W402(T) was 67.3 mol%. Taken together, these results confirm that W402(T) represents a novel species of the genus Falsirhodobacter, for which the name Falsirhodobacter deserti sp. nov. is proposed. The type strain is W402(T) ( = ACCC 05851(T) = KCTC 32408(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • China
  • DNA, Bacterial / genetics
  • Desert Climate
  • Fatty Acids / chemistry
  • Heterotrophic Processes
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Phosphatidylethanolamines / chemistry
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Rhizosphere*
  • Rhodobacteraceae / classification*
  • Rhodobacteraceae / genetics
  • Rhodobacteraceae / isolation & purification
  • Sequence Analysis, DNA
  • Soil Microbiology*
  • Tamaricaceae / microbiology*

Substances

  • DNA, Bacterial
  • Fatty Acids
  • Phosphatidylethanolamines
  • RNA, Ribosomal, 16S
  • phosphatidylethanolamine

Associated data

  • GENBANK/KF268394