Next generation sequencing yields the complete mitochondrial genome of the Hornlip mullet Plicomugil labiosus (Teleostei: Mugilidae)

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 May;27(3):2192-3. doi: 10.3109/19401736.2014.982621. Epub 2014 Nov 25.

Abstract

In this study, the complete mitogenome sequence of hornlip mullet Plicomugil labiosus (Teleostei: Mugilidae) has been sequenced by next-generation sequencing method. The assembled mitogenome, consisting of 16,829 bp, had the typical vertebrate mitochondrial gene arrangement, including 13 protein coding genes, 22 transfer RNAs, 2 ribosomal RNAs genes and a non-coding control region of D-loop. D-loop contains 1057 bp length is located between tRNA-Pro and tRNA-Phe. The overall base composition of P. labiosus is 28.0% for A, 29.3% for C, 15.5% for G and 27.2% for T. The complete mitogenome may provide essential and important DNA molecular data for further population, phylogenetic and evolutionary analysis for Mugilidae.

Keywords: Hornlip mullet; Mugilidae; mitogenome; next generation sequencing.

MeSH terms

  • Animals
  • Base Composition / genetics
  • Base Sequence / genetics
  • DNA, Mitochondrial / genetics
  • Gene Order / genetics
  • Genes, Mitochondrial
  • Genome / genetics
  • Genome, Mitochondrial / genetics*
  • High-Throughput Nucleotide Sequencing / methods
  • Mitochondria / genetics
  • Phylogeny
  • Sequence Analysis, DNA / methods
  • Smegmamorpha / genetics*
  • Whole Genome Sequencing / methods

Substances

  • DNA, Mitochondrial