Description of the mitochondrial genome of yellowtail scad Atule mate (Perciformes: Carangidae)

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 May;27(3):2186-7. doi: 10.3109/19401736.2014.982618. Epub 2014 Nov 25.

Abstract

The yellowtail scad Atule mate is an economic fish species distributed throughout the tropical and subtropical oceans of the Indo-Pacific region. In the present study, we assembled the complete mitochondrial genome of A. mate from contiguous, overlapping segments amplified by PCR. The mitogenome sequence was 16,565 bp in length, consisting of 37 typical animal mitochondrial genes and 1 control region, same with the typical vertebrate mitochondrial gene arrangement. The overall base composition of the heavy strand was 28.4% for A, 27.6% for T, 16.3% for G, and 27.7% for C. Phylogenetic analyses using the protein-coding gene sequences reveal that genus Atule was most closely related to Alepes.

Keywords: Atule mate; carangidae; mitogenome.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Composition / genetics
  • Base Sequence / genetics
  • DNA, Mitochondrial / genetics
  • Fishes / genetics
  • Gene Order / genetics
  • Genes, Mitochondrial / genetics
  • Genome / genetics
  • Genome, Mitochondrial / genetics*
  • Mitochondria / genetics
  • Perciformes / genetics*
  • Phylogeny
  • Sequence Analysis, DNA / methods
  • Whole Genome Sequencing / methods

Substances

  • DNA, Mitochondrial