Characterization of uncultivable bat influenza virus using a replicative synthetic virus

PLoS Pathog. 2014 Oct 2;10(10):e1004420. doi: 10.1371/journal.ppat.1004420. eCollection 2014 Oct.

Abstract

Bats harbor many viruses, which are periodically transmitted to humans resulting in outbreaks of disease (e.g., Ebola, SARS-CoV). Recently, influenza virus-like sequences were identified in bats; however, the viruses could not be cultured. This discovery aroused great interest in understanding the evolutionary history and pandemic potential of bat-influenza. Using synthetic genomics, we were unable to rescue the wild type bat virus, but could rescue a modified bat-influenza virus that had the HA and NA coding regions replaced with those of A/PR/8/1934 (H1N1). This modified bat-influenza virus replicated efficiently in vitro and in mice, resulting in severe disease. Additional studies using a bat-influenza virus that had the HA and NA of A/swine/Texas/4199-2/1998 (H3N2) showed that the PR8 HA and NA contributed to the pathogenicity in mice. Unlike other influenza viruses, engineering truncations hypothesized to reduce interferon antagonism into the NS1 protein didn't attenuate bat-influenza. In contrast, substitution of a putative virulence mutation from the bat-influenza PB2 significantly attenuated the virus in mice and introduction of a putative virulence mutation increased its pathogenicity. Mini-genome replication studies and virus reassortment experiments demonstrated that bat-influenza has very limited genetic and protein compatibility with Type A or Type B influenza viruses, yet it readily reassorts with another divergent bat-influenza virus, suggesting that the bat-influenza lineage may represent a new Genus/Species within the Orthomyxoviridae family. Collectively, our data indicate that the bat-influenza viruses recently identified are authentic viruses that pose little, if any, pandemic threat to humans; however, they provide new insights into the evolution and basic biology of influenza viruses.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Line
  • Chiroptera / virology*
  • Humans
  • Influenza A Virus, H1N1 Subtype / genetics*
  • Influenza A Virus, H3N2 Subtype / genetics*
  • Mice
  • Orthomyxoviridae Infections*
  • Swine
  • Viral Proteins / metabolism
  • Virus Replication / genetics*

Substances

  • Viral Proteins

Grants and funding

These studies were supported by; Kansas State University (Start-up SRO001), European Commission FP7-GA258084, Department of Homeland Security Contract HSHQDC-13-C-B0016, and the J. Craig Venter Institute (DEW, Start-up 0394). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.