Structural studies suggest a peptidoglycan hydrolase function for the Mycobacterium tuberculosis Tat-secreted protein Rv2525c

J Struct Biol. 2014 Nov;188(2):156-64. doi: 10.1016/j.jsb.2014.09.003. Epub 2014 Sep 24.

Abstract

Among the few proteins shown to be secreted by the Tat system in Mycobacterium tuberculosis, Rv2525c is of particular interest, since its gene is conserved in the minimal genome of Mycobacterium leprae. Previous evidence linked this protein to cell wall metabolism and sensitivity to β-lactams. We describe here the crystal structure of Rv2525c that shows a TIM barrel-like fold characteristic of glycoside hydrolases of the GH25 family, which includes prokaryotic and phage-encoded peptidoglycan hydrolases. Structural comparison with other members of this family combined with substrate docking suggest that, although the 'neighbouring group' catalytic mechanism proposed for this family still appears as the most plausible, the identity of residues involved in catalysis in GH25 hydrolases might need to be revised.

Keywords: GH25; Peptidoglycan hydrolase; Tat secretion pathway; Tuberculosis.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Bacterial Proteins / metabolism*
  • Catalysis
  • Catalytic Domain
  • Cell Wall / metabolism
  • Crystallography, X-Ray / methods
  • Gene Products, tat / metabolism*
  • Molecular Sequence Data
  • Mycobacterium tuberculosis / metabolism*
  • N-Acetylmuramoyl-L-alanine Amidase / chemistry*
  • N-Acetylmuramoyl-L-alanine Amidase / metabolism*
  • Sequence Alignment

Substances

  • Bacterial Proteins
  • Gene Products, tat
  • N-Acetylmuramoyl-L-alanine Amidase