Photoionization spectroscopy of nucleobases and analogues in the gas phase using synchrotron radiation as excitation light source

Top Curr Chem. 2015:355:155-208. doi: 10.1007/128_2014_550.

Abstract

We review here the photoionization and photoelectron spectroscopy of the gas phase nucleic acid bases adenine, thymine, uracil, cytosine, and guanine, as well as the three base analogues 2-hydroxyisoquinoline, 2-pyridone, and δ-valerolactam in the vacuum ultraviolet (VUV) spectral regime. The chapter focuses on experimental work performed with VUV synchrotron radiation and related ab initio quantum chemical calculations of higher excited states beyond the ionization energy. After a general part, where experimental and theoretical techniques are described in detail, key results are presented by order of growing complexity in the spectra of the molecules. Here we concentrate on (1) the accurate determination of ionization energies of isolated gas phase NABs and investigation of the vibrational structure of involved ionic states, including their mutual vibronic couplings, (2) the treatment of tautomerism after photoionization, in competition with other intramolecular processes, (3) the study of fragmentation of these molecular systems at low and high internal energies, and (4) the study of the evolution of the covalent character of hydrogen bonding upon substitution, i.e., examination of electronic effects (acceptor, donor, etc.).

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Adenine / analogs & derivatives
  • Adenine / chemistry
  • Adenine / radiation effects*
  • Cytosine / analogs & derivatives
  • Cytosine / chemistry
  • Cytosine / radiation effects*
  • Electrons
  • Energy Transfer
  • Guanine / analogs & derivatives
  • Guanine / chemistry
  • Guanine / radiation effects*
  • Mass Spectrometry
  • Models, Theoretical
  • Molecular Structure
  • Phase Transition
  • Photochemical Processes
  • Photoelectron Spectroscopy
  • Radiation, Ionizing*
  • Synchrotrons*
  • Thymine / analogs & derivatives
  • Thymine / chemistry
  • Thymine / radiation effects*
  • Uracil / analogs & derivatives
  • Uracil / chemistry
  • Uracil / radiation effects*

Substances

  • Uracil
  • Guanine
  • Cytosine
  • Adenine
  • Thymine