Time series for blind biosignal classification model

Comput Biol Med. 2014 Nov:54:32-6. doi: 10.1016/j.compbiomed.2014.08.007. Epub 2014 Aug 19.

Abstract

Biosignals such as electrocardiograms (ECG), electroencephalograms (EEG), and electromyograms (EMG), are important noninvasive measurements useful for making diagnostic decisions. Recently, considerable research has been conducted in order to potentially automate signal classification for assisting in disease diagnosis. However, the biosignal type (ECG, EEG, EMG or other) needs to be known prior to the classification process. If the given biosignal is of an unknown type, none of the existing methodologies can be utilized. In this paper, a blind biosignal classification model (B(2)SC Model) is proposed in order to identify the source biosignal type automatically, and thus ultimately benefit the diagnostic decision. The approach employs time series algorithms for constructing the model. It uses a dynamic time warping (DTW) algorithm with clustering to discover the similarity between two biosignals, and consequently classifies disease without prior knowledge of the source signal type. The empirical experiments presented in this paper demonstrate the effectiveness of the method as well as the scalability of the approach.

Keywords: Bioinformatics; Blind biosignal classification; Dynamic time warping (DTW); Machine learning; Time series clustering.

MeSH terms

  • Algorithms*
  • Animals
  • Artificial Intelligence*
  • Computer Simulation
  • Data Interpretation, Statistical
  • Diagnosis, Computer-Assisted / methods*
  • Electrodiagnosis / methods*
  • Humans
  • Models, Statistical*
  • Pattern Recognition, Automated / methods*
  • Signal Processing, Computer-Assisted*