Characterization of a lichenase isolated from soil metagenome

J Microbiol Biotechnol. 2014 Dec 28;24(12):1699-706. doi: 10.4014/jmb.1406.06012.

Abstract

A lichenase gene (mt-lic) was identified for the first time through function-based screening of a soil metagenomic library. Its deduced amino acid sequence exhibited a high degree of homology with endo-β-1,3-1,4-glucanase (having both lichenase and chitosanase activities), encoded by the bgc gene of Bacillus circulans WL-12. The recombinant lichenase overexpressed and purified from Escherichia coli was able to efficiently hydrolyze both barley β-glucan and lichenan. The enzyme showed maximal activity at a pH of 6.0 at 50°C, with Azo-barley-glucan as the substrate. The metal ions Mn(2+), Mg(2+), Ca(2+), and Fe(2+) enhanced the enzymatic activity, whereas the Cu(2+) and Zn(2+) ions inhibited the enzymatic activity. The Km and Vmax values of the purified lichenase were determined to be 0.45 mg/ml and 24.83 U/min/mg of protein, respectively.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacillus / genetics
  • Cloning, Molecular
  • Enzyme Activators / metabolism
  • Enzyme Inhibitors / metabolism
  • Enzyme Stability
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Gene Expression
  • Gene Library*
  • Glucans / metabolism
  • Glycoside Hydrolases / genetics
  • Glycoside Hydrolases / isolation & purification*
  • Glycoside Hydrolases / metabolism*
  • Hydrogen-Ion Concentration
  • Kinetics
  • Metagenomics
  • Metals / metabolism
  • Molecular Sequence Data
  • Recombinant Proteins / genetics
  • Recombinant Proteins / isolation & purification
  • Recombinant Proteins / metabolism
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Soil Microbiology*
  • Substrate Specificity
  • Temperature
  • beta-Glucans / metabolism

Substances

  • Enzyme Activators
  • Enzyme Inhibitors
  • Glucans
  • Metals
  • Recombinant Proteins
  • beta-Glucans
  • Glycoside Hydrolases
  • licheninase
  • lichenin

Associated data

  • GENBANK/KM079629