Lateral opening and exit pore formation are required for BamA function

Structure. 2014 Jul 8;22(7):1055-62. doi: 10.1016/j.str.2014.05.008. Epub 2014 Jun 26.

Abstract

The outer membrane of Gram-negative bacteria is replete with a host of β-barrel outer membrane proteins (OMPs). Despite serving a variety of essential functions, including immune response evasion, the exact mechanism of OMP folding and membrane insertion remains largely unclear. The β-barrel assembly machinery complex is required for OMP biogenesis. Crystal structures and molecular dynamics (MD) simulations of the central and essential component, BamA, suggest a mechanism involving lateral opening of its barrel domain. MD simulations reported here reveal an additional feature of BamA: a substrate exit pore positioned above the lateral opening site. Disulfide crosslinks that prevent lateral opening and exit pore formation result in a loss of BamA function, which can be fully rescued by the reductant tris(2-carboxyethyl)phosphine. These data provide strong evidence that lateral opening and exit pore formation are required for BamA function.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Outer Membrane Proteins / chemistry*
  • Bacterial Outer Membrane Proteins / genetics
  • Bacterial Outer Membrane Proteins / metabolism*
  • Cross-Linking Reagents / chemistry
  • Cross-Linking Reagents / metabolism
  • Disulfides / chemistry
  • Disulfides / metabolism
  • Escherichia coli / genetics
  • Escherichia coli / metabolism
  • Escherichia coli Proteins / chemistry*
  • Escherichia coli Proteins / genetics
  • Escherichia coli Proteins / metabolism*
  • Molecular Dynamics Simulation
  • Mutation
  • Phosphines / chemistry
  • Phosphines / metabolism
  • Protein Folding
  • Protein Structure, Tertiary

Substances

  • Bacterial Outer Membrane Proteins
  • BamA protein, E coli
  • Cross-Linking Reagents
  • Disulfides
  • Escherichia coli Proteins
  • Phosphines
  • tris(2-carboxyethyl)phosphine