A unique gene cluster for the utilization of the mucosal and human milk-associated glycans galacto-N-biose and lacto-N-biose in Lactobacillus casei

Mol Microbiol. 2014 Aug;93(3):521-38. doi: 10.1111/mmi.12678. Epub 2014 Jul 3.

Abstract

The probiotic Lactobacillus casei catabolizes galacto-N-biose (GNB) and lacto-N-biose (LNB) by using a transport system and metabolic routes different from those of Bifidobacterium. L. casei contains a gene cluster, gnbREFGBCDA, involved in the metabolism of GNB, LNB and also N-acetylgalactosamine. Inactivation of gnbC (EIIC) or ptsI (Enzyme I) of the phosphoenolpyruvate : sugar phosphotransferase system (PTS) prevented the growth on those three carbohydrates, indicating that they are transported and phosphorylated by the same PTS(Gnb) . Enzyme activities and growth analysis with knockout mutants showed that GnbG (phospho-β-galactosidase) hydrolyses both disaccharides. However, GnbF (N-acetylgalactosamine-6P deacetylase) and GnbE (galactosamine-6P isomerase/deaminase) are involved in GNB but not in LNB fermentation. The utilization of LNB depends on nagA (N-acetylglucosamine-6P deacetylase), showing that the N-acetylhexosamine moieties of GNB and LNB follow different catabolic routes. A lacAB mutant (galactose-6P isomerase) was impaired in GNB and LNB utilization, indicating that their galactose moiety is channelled through the tagatose-6P pathway. Transcriptional analysis showed that the gnb operon is regulated by substrate-specific induction mediated by the transcriptional repressor GnbR, which binds to a 26 bp DNA region containing inverted repeats exhibiting a 2T/2A conserved core. The data represent the first characterization of novel metabolic pathways for human milk oligosaccharides and glycoconjugate structures in Firmicutes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetylglucosamine / analogs & derivatives*
  • Acetylglucosamine / metabolism
  • Bacterial Proteins / metabolism
  • Disaccharides / metabolism*
  • Galactose / metabolism
  • Gene Expression Profiling
  • Gene Knockout Techniques
  • Genes, Bacterial
  • Humans
  • Lacticaseibacillus casei / genetics*
  • Lacticaseibacillus casei / metabolism*
  • Milk, Human / chemistry*
  • Mucous Membrane / chemistry*
  • Multigene Family*
  • Mutation
  • Operon
  • Phosphoenolpyruvate / metabolism*
  • Polysaccharides
  • Real-Time Polymerase Chain Reaction
  • beta-Galactosidase / genetics

Substances

  • Bacterial Proteins
  • Disaccharides
  • Polysaccharides
  • 6-O-galactopyranosylgalactose
  • galactosyl-1,3-N-acetylglucosamine
  • Phosphoenolpyruvate
  • beta-Galactosidase
  • Acetylglucosamine
  • Galactose