Bacterial community structure and activity of sulfate reducing bacteria in a membrane aerated biofilm analyzed by microsensor and molecular techniques

Biotechnol Bioeng. 2014 Nov;111(11):2155-62. doi: 10.1002/bit.25277. Epub 2014 Jul 4.

Abstract

The activities and vertical spatial distribution of sulfate reducing bacteria (SRB) in an oxygen (O2 )-based membrane aerated biofilm (MAB) were investigated using microsensor (O2 and H2 S) measurements and molecular techniques (polymerase chain reaction-denaturing gradient gel electrophoresis [PCR-DGGE] and fluorescence in situ hybridization [FISH]). The O2 concentration profile revealed that O2 penetrated from the bottom (substratum) of the gas permeable membrane, and was gradually consumed within the biofilm until it was completely depleted near the biofilm/bulk liquid interface, indicating oxic and anoxic zone in the MAB. The H2 S concentration profile showed that H2 S production was found in the upper 285 µm of the biofilm, indicating a high activity of SRB in this region. The results from DGGE of the PCR-amplified dissimilatory sulfite reductase subunit B (dsrB) gene and FISH showed an uneven spatial distribution of SRB. The maximum SRB biomass was located in the upper biofilm. The information from the molecular analysis can be supplemented with that from microsensor measurements to better understand the microbial community and activity of SRB in the MAB.

Keywords: membrane aerated biofilm; microsensor; molecular technique; sulfate reducing bacteria.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aerobiosis
  • Bacteria, Aerobic / classification*
  • Bacteria, Aerobic / isolation & purification*
  • Biofilms / growth & development*
  • Biota*
  • Denaturing Gradient Gel Electrophoresis
  • Environmental Microbiology*
  • Hydrogen Sulfide / analysis
  • In Situ Hybridization, Fluorescence
  • Membranes
  • Oxidation-Reduction
  • Oxygen / analysis
  • Polymerase Chain Reaction
  • Sulfates / metabolism*

Substances

  • Sulfates
  • Oxygen
  • Hydrogen Sulfide