Use of transmission electron microscopy to identify nanocrystals of challenging protein targets

Proc Natl Acad Sci U S A. 2014 Jun 10;111(23):8470-5. doi: 10.1073/pnas.1400240111. Epub 2014 May 28.

Abstract

The current practice for identifying crystal hits for X-ray crystallography relies on optical microscopy techniques that are limited to detecting crystals no smaller than 5 μm. Because of these limitations, nanometer-sized protein crystals cannot be distinguished from common amorphous precipitates, and therefore go unnoticed during screening. These crystals would be ideal candidates for further optimization or for femtosecond X-ray protein nanocrystallography. The latter technique offers the possibility to solve high-resolution structures using submicron crystals. Transmission electron microscopy (TEM) was used to visualize nanocrystals (NCs) found in crystallization drops that would classically not be considered as "hits." We found that protein NCs were readily detected in all samples tested, including multiprotein complexes and membrane proteins. NC quality was evaluated by TEM visualization of lattices, and diffraction quality was validated by experiments in an X-ray free electron laser.

Keywords: crystal characterization; crystal optimization; femtosecond diffraction; nanocrystal detection; structural biology.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Animals
  • Crystallization
  • Crystallography, X-Ray
  • Escherichia coli / genetics
  • Microscopy, Electron, Transmission / methods*
  • Nanoparticles / chemistry
  • Nanoparticles / ultrastructure*
  • Proteins / chemistry
  • Proteins / genetics
  • Proteins / ultrastructure*
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / ultrastructure*
  • Reproducibility of Results
  • Sf9 Cells

Substances

  • Proteins
  • Recombinant Proteins