Oil-encapsulated nanodroplet array for bio-molecular detection

Ann Biomed Eng. 2014 Sep;42(9):1932-41. doi: 10.1007/s10439-014-1039-z. Epub 2014 May 28.

Abstract

Detection of low abundance biomolecules is challenging for biosensors that rely on surface chemical reactions. For surface reaction based biosensors, it require to take hours or even days for biomolecules of diffusivities in the order of 10(-10-11) m2/s to reach the surface of the sensors by Brownian motion. In addition, often times the repelling Coulomb interactions between the molecules and the probes further defer the binding process, leading to undesirably long detection time for applications such as point-of-care in vitro diagnosis. In this work, we designed an oil encapsulated nanodroplet array microchip utilizing evaporation for pre-concentration of the targets to greatly shorten the reaction time and enhance the detection sensitivity. The evaporation process of the droplets is facilitated by the superhydrophilic surface and resulting nanodroplets are encapsulated by oil drops to form stable reaction chamber. Using this method, desirable droplet volumes, concentrations of target molecules, and reaction conditions (salt concentrations, reaction temperature, etc.) in favour of fast and sensitive detection are obtained. A linear response over 2 orders of magnitude in target concentration was achieved at 10 fM for protein targets and 100 fM for miRNA mimic oligonucleotides.

MeSH terms

  • Biosensing Techniques*
  • DNA / analysis*
  • Hydrophobic and Hydrophilic Interactions
  • MicroRNAs / analysis*
  • Microarray Analysis*
  • Nanostructures
  • Oils
  • Oligonucleotides / analysis*
  • Silicon / chemistry
  • Silicon Dioxide / chemistry
  • Streptavidin / analysis*
  • Surface Properties

Substances

  • MicroRNAs
  • Oils
  • Oligonucleotides
  • Silicon Dioxide
  • DNA
  • Streptavidin
  • Silicon