Vibrational energy relaxation of the amide I mode of N-methylacetamide in D₂O studied through Born-Oppenheimer molecular dynamics

J Phys Chem B. 2014 Jun 12;118(23):6186-97. doi: 10.1021/jp500304z. Epub 2014 Jun 4.

Abstract

The vibrational relaxation of the amide I mode of deuterated N-methylacetamide in D2O solution is studied through nonequilibrium simulations using the semiempirical Born-Oppenheimer molecular dynamics (SEBOMD) approach to describe the whole solute-solvent system. Relaxation pathways and lifetimes are determined using the instantaneous normal mode (INM) analysis. The relaxation of the amide I mode is characterized by three different time scales; most of the excess energy (80%) is redistributed through intramolecular vibrational energy redistribution processes, with a smaller contribution (20%) of intermolecular energy flowing into the solvent. The amide II mode is found to contribute modestly (7%) to the relaxation mechanism. The amide I mode and the total vibrational energy decay curves obtained using SEBOMD and INM are in satisfactory agreement with the experimental measurements.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetamides / chemistry*
  • Deuterium Oxide / chemistry*
  • Molecular Dynamics Simulation*
  • Solutions
  • Solvents / chemistry
  • Temperature
  • Vibration*

Substances

  • Acetamides
  • Solutions
  • Solvents
  • Deuterium Oxide
  • N-methylacetamide