Cu(I)-mediated allosteric switching in a copper-sensing operon repressor (CsoR)

J Biol Chem. 2014 Jul 4;289(27):19204-17. doi: 10.1074/jbc.M114.556704. Epub 2014 May 15.

Abstract

The copper-sensing operon repressor (CsoR) is representative of a major Cu(I)-sensing family of bacterial metalloregulatory proteins that has evolved to prevent cytoplasmic copper toxicity. It is unknown how Cu(I) binding to tetrameric CsoRs mediates transcriptional derepression of copper resistance genes. A phylogenetic analysis of 227 DUF156 protein members, including biochemically or structurally characterized CsoR/RcnR repressors, reveals that Geobacillus thermodenitrificans (Gt) CsoR characterized here is representative of CsoRs from pathogenic bacilli Listeria monocytogenes and Bacillus anthracis. The 2.56 Å structure of Cu(I)-bound Gt CsoR reveals that Cu(I) binding induces a kink in the α2-helix between two conserved copper-ligating residues and folds an N-terminal tail (residues 12-19) over the Cu(I) binding site. NMR studies of Gt CsoR reveal that this tail is flexible in the apo-state with these dynamics quenched upon Cu(I) binding. Small angle x-ray scattering experiments on an N-terminally truncated Gt CsoR (Δ2-10) reveal that the Cu(I)-bound tetramer is hydrodynamically more compact than is the apo-state. The implications of these findings for the allosteric mechanisms of other CsoR/RcnR repressors are discussed.

Keywords: Copper; Metal Sensor Protein; Metalloregulation; Phylogenetics; Transcription Repressor; X-ray Crystallography; X-ray Scattering.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Allosteric Regulation / drug effects
  • Bacillus anthracis / genetics
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism*
  • Copper / metabolism*
  • Copper / pharmacology
  • DNA, Bacterial / metabolism
  • Gene Expression Regulation, Bacterial
  • Geobacillus / metabolism
  • Models, Molecular
  • Operon / genetics*
  • Phylogeny
  • Protein Multimerization
  • Protein Structure, Quaternary
  • Repressor Proteins / chemistry
  • Repressor Proteins / metabolism*
  • Transcription, Genetic

Substances

  • Bacterial Proteins
  • DNA, Bacterial
  • Repressor Proteins
  • Copper