Role of differential transport in an oscillatory enzyme reaction

J Phys Chem B. 2014 Jun 12;118(23):6092-7. doi: 10.1021/jp5019795. Epub 2014 May 28.

Abstract

As a result of the bell-shaped pH-rate characteristic of enzymatic processes, feedback may arise in enzyme reactions having non-neutral products. This special type of product activation has been shown to lead to self-sustained pH oscillations in an enzyme-loaded membrane. We investigate the possibility of oscillations in a model of the urea-urease reaction, prompted by the recent experimental discovery of feedback in this reaction. An open system is considered in which acid and urea are transported to a cell containing the enzyme. Using linear stability analysis we determine the range of transport coefficients limit cycles may exist for and show that differential transport is required for oscillations in a class of compartmentalized enzyme processes similar to the urea-urease system. We demonstrate that although the transport rate of acid (k(H)) must be greater than that of urea (k(S)) for oscillations in a urease-loaded membrane, bistability is possible for k(S) ≥ k(H).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Enzyme Stability
  • Hydrogen-Ion Concentration
  • Hydrolysis
  • Kinetics
  • Linear Models
  • Membranes / chemistry
  • Models, Chemical
  • Urea / chemistry*
  • Urease / chemistry*

Substances

  • Urea
  • Urease