Temperature impacts differentially on the methanogenic food web of cellulose-supplemented peatland soil

Environ Microbiol. 2015 Mar;17(3):720-34. doi: 10.1111/1462-2920.12507. Epub 2014 Jun 9.

Abstract

The impact of temperature on the largely unresolved intermediary ecosystem metabolism and associated unknown microbiota that link cellulose degradation and methane production in soils of a moderately acidic (pH 4.5) fen was investigated. Supplemental [(13) C]cellulose stimulated the accumulation of propionate, acetate and carbon dioxide as well as initial methane production in anoxic peat soil slurries at 15°C and 5°C. Accumulation of organic acids at 15°C was twice as fast as that at 5°C. 16S rRNA [(13) C]cellulose stable isotope probing identified novel unclassified Bacteria (79% identity to the next cultured relative Fibrobacter succinogenes), unclassified Bacteroidetes (89% identity to Prolixibacter bellariivorans), Porphyromonadaceae, Acidobacteriaceae and Ruminococcaceae as main anaerobic degraders of cellulose-derived carbon at both 15°C and 5°C. Holophagaceae and Spirochaetaceae were more abundant at 15°C. Clostridiaceae dominated the degradation of cellulose-derived carbon only at 5°C. Methanosarcina was the dominant methanogenic taxa at both 15°C and 5°C. Relative abundance of Methanocella increased at 15°C whereas that of Methanoregula and Methanosaeta increased at 5°C. Thaumarchaeota closely related to Nitrosotalea (presently not known to grow anaerobically) were abundant at 5°C but absent at 15°C indicating that Nitrosotalea sp. might be capable of anaerobic growth at low temperatures in peat.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetic Acid / metabolism
  • Anaerobiosis / physiology
  • Archaea / classification
  • Archaea / genetics
  • Archaea / metabolism*
  • Bacteria / classification
  • Bacteria / genetics
  • Bacteria / metabolism*
  • Carbon / metabolism
  • Carbon Dioxide / metabolism
  • Cellulose / metabolism
  • Ecosystem
  • Euryarchaeota / classification
  • Euryarchaeota / genetics
  • Euryarchaeota / metabolism
  • Food Chain*
  • Methane / metabolism*
  • Methanosarcinaceae / classification
  • Methanosarcinaceae / genetics
  • Methanosarcinaceae / metabolism
  • Propionates / metabolism
  • RNA, Ribosomal, 16S / genetics
  • Soil Microbiology*
  • Soil*
  • Temperature

Substances

  • Propionates
  • RNA, Ribosomal, 16S
  • Soil
  • Carbon Dioxide
  • Carbon
  • Cellulose
  • Methane
  • Acetic Acid