Sky1 regulates the expression of sulfur metabolism genes in response to cisplatin

Microbiology (Reading). 2014 Jul;160(Pt 7):1357-1368. doi: 10.1099/mic.0.078402-0. Epub 2014 Apr 24.

Abstract

Cisplatin is commonly used in cancer therapy and yeast cells are also sensitive to this compound. We present a transcriptome analysis discriminating between RNA changes induced by cisplatin treatment, which are dependent on or independent of SKY1 function--a gene whose deletion increases resistance to the drug. Gene expression changes produced by addition of cisplatin to W303 and W303-Δsky1 cells were recorded using DNA microarrays. The data, validated by quantitative PCR, revealed 122 differentially expressed genes: 69 upregulated and 53 downregulated. Among the upregulated genes, those related to sulfur metabolism were over-represented and partially dependent on Sky1. Deletions of MET4 or other genes encoding co-regulators of the expression of sulfur-metabolism-related genes, with the exception of MET28, did not modify the cisplatin sensitivity of yeast cells. One of the genes with the highest cisplatin-induced upregulation was SEO1, encoding a putative permease of sulfur compounds. We also measured the platinum, sulfur and glutathione content in W303, W303-Δsky1 and W303-Δseo1 cells after cisplatin treatment, and integration of the data suggested that these transcriptional changes might represent a cellular response that allowed chelation of cisplatin with sulfur-containing amino acids and also helped DNA repair by stimulating purine biosynthesis. The transcription pattern of stimulation of sulfur-containing amino acids and purine synthesis decreased, or even disappeared, in the W303-Δsky1 strain.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antineoplastic Agents / pharmacology*
  • Cisplatin / pharmacology*
  • Down-Regulation
  • Gene Expression
  • Gene Expression Profiling
  • Gene Expression Regulation, Fungal*
  • Glutathione / analysis
  • Glutathione / metabolism
  • Inhibitory Concentration 50
  • Metabolic Networks and Pathways
  • Platinum / analysis
  • Platinum / metabolism
  • Protein Serine-Threonine Kinases / genetics*
  • Protein Serine-Threonine Kinases / metabolism
  • Saccharomyces cerevisiae / drug effects
  • Saccharomyces cerevisiae / enzymology
  • Saccharomyces cerevisiae / genetics*
  • Saccharomyces cerevisiae Proteins / genetics*
  • Saccharomyces cerevisiae Proteins / metabolism
  • Sequence Deletion
  • Sulfur / analysis
  • Sulfur / metabolism*
  • Transcriptome
  • Up-Regulation

Substances

  • Antineoplastic Agents
  • Saccharomyces cerevisiae Proteins
  • Platinum
  • Sulfur
  • SKY1 protein, S cerevisiae
  • Protein Serine-Threonine Kinases
  • Glutathione
  • Cisplatin

Associated data

  • GEO/GSE41094