Deep sequencing of the mantle transcriptome of the great scallop Pecten maximus

Sébastien Artigaud; Michael A S Thorne; Joëlle Richard; Romain Lavaud; Fred Jean; Jonathan Flye-Sainte-Marie; Lloyd S Peck; Vianney Pichereau; Melody S Clark

doi:10.1016/j.margen.2014.03.006

Deep sequencing of the mantle transcriptome of the great scallop Pecten maximus

Mar Genomics. 2014 Jun:15:3-4. doi: 10.1016/j.margen.2014.03.006. Epub 2014 Apr 13.

Authors

Sébastien Artigaud¹, Michael A S Thorne², Joëlle Richard³, Romain Lavaud³, Fred Jean³, Jonathan Flye-Sainte-Marie³, Lloyd S Peck², Vianney Pichereau³, Melody S Clark²

Affiliations

¹ Laboratoire des Sciences de l'Environnement Marin, LEMAR UMR 6539 CNRS/UBO/IRD/Ifremer, Université de Bretagne Occidentale, Institut Universitaire Européen de la Mer, 29280 Plouzané, France. Electronic address: sebastien.artigaud@gmx.com.
² British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge CB3 0ET, UK.
³ Laboratoire des Sciences de l'Environnement Marin, LEMAR UMR 6539 CNRS/UBO/IRD/Ifremer, Université de Bretagne Occidentale, Institut Universitaire Européen de la Mer, 29280 Plouzané, France.

PMID: 24731930
DOI: 10.1016/j.margen.2014.03.006

Abstract

RNA-Seq transcriptome data were generated from mantle tissue of the great scallop, Pecten maximus. The consensus data were produced from a time course series of animals subjected to a 56-day thermal challenge at 3 different temperatures. A total of 26,064 contigs were assembled de novo, providing a useful resource for both the aquaculture community and researchers with an interest in mollusc shell production.

Keywords: Pecten maximus; RNAseq; Temperature.

Publication types

Research Support, Non-U.S. Gov't

MeSH terms

Animals
Aquaculture
Base Sequence
High-Throughput Nucleotide Sequencing / methods
Molecular Sequence Data
Pecten / genetics*
Pecten / growth & development
Pecten / metabolism
Sequence Analysis, RNA
Temperature*
Transcriptome / genetics*